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A Novel Approach for MRI Brain Image Segmentation using Local Independent Projection Model

S. Mohamed Vijithan, Kumar Parasuraman, T. Arumuga Maria Devi

Abstract


Brain tumor segmentation is an important process for tumor identification and assists to planning for further treatment. Although several brain tumor segmentation methods are existing, still efficient brain tumor segmentation is challenging in medical field. To achieve the high detection accuracy of tumor part with lower error rate, we have lots of enhancing techniques for the tumor segmentation methods. In this paper, we propose a Novel approach for brain Image Segmentation using Local Independent Projection Model for MRI images. The main objective of this paper is to develop a system for brain segmentation based on local independent projection classification. The proposed system has 2 stages such as training and testing and it has 4 steps such as pre-processing, feature extraction, segmentation and post processing. Preprocessing is done before starting process. In feature extraction the related features from the input data to be retrieved. This project proposed the patch based method used for feature extraction. Then apply the local independent projection classification. The segmentation of brain tumor can be assumed as a multiclass classification problem. Resolving this problem by One-Versus-All (OvA) strategy In this strategy, a classifier is trained for each class to differentiate a class from all other classes. In this classification first construct the dictionary based on original samples in training set. Then present the sparse representation using locally linear representation. Dictionary construction is performed by using manually labeled original samples in a training set. In order to achieve classification scores, Softmax regression model is used. By using learned as well as without learned softmax regression model, classification accuracy was tested. Finally calculate the classification score computation. After post processing to get the final results.


Keywords


Segmentation, LIPCs, Brain, Tumor, Medical Image and Preprocessing

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References


D. D. Langleben and G. M. Segall, “PET in differentiation of recurrent brain tumor from radiation injury,” J. Nucl. Med., vol. 41, pp. 1861–1867, 2000.

A. Demirhan, İ. Güler, “Image segmentation using self-organizing maps and gray level co-occurrence matrices,” J. Fac. Eng. Arch. Gazi Univ., vol. 25, no. 2, pp. 285-291, 2010.

M. Kaus, S. K. Warfield, F. A. Jolesz, and R. Kikinis, “Adaptive template moderated brain tumor segmentation in MRI,” in Proc. Bildverarbeitung für die Medizin, 1999, pp.102-106.

M. Straka, A.L. Cruz, A. Kochl, M. Sramek, M.E. Groller, D. Fleischmann, “3D watershed transform combined with a probabilistic atlas for medical image segmentation”, in Proc. MIT2003, 2003, pp. 1-8.

H.-H. Chang, D. J. Valentino, G. R. Duckwiler, and A. W. Toga, “Segmentation of brain MR images using a charged fluid model,” IEEE Trans. Biomed. Eng., vol. 54, no. 10, pp. 1798-1813, Oct. 2007.

J. J. Corso, E. Sharon, S. Dube, S. El-Saden, U. Sinha, and A. Yuille, “Efficient multilevel brain tumor segmentation with integrated Bayesian model classification,” IEEE Trans. Med. Imag., vol. 27, no. 5, pp. 629-640, May 2008.

J. R. Jiménez-Alaniz, V. Medina-Bañuelos, and O. Yáñez-Suárez, “Data-driven brain MRI segmentation supported on edge confidence and a priori tissue information,” IEEE Trans. Med. Imag., vol. 25, no. 1, pp. 74-83, Jan 2006.

W. E. Reddick, J. O. Glass, E. N. Cook, T. D. Elkin, and R. J. Deaton, “Automated segmentation and classification of multispectral magnetic resonance images of brain using artificial neural networks,” IEEE Trans. Med. Imag., vol. 16, no. 6, pp. 911-918, Dec 1997.

T. Song, M. M. Jamshidi, R. R. Lee, and M. Huang, “A modified probabilistic neural network for partial volume segmentation in brain MR image,” IEEE Trans. Neural Netw., vol. 18, no. 5, pp. 1424-1432, Sept 2007.

H. A. Vrooman, C. A. Cocosco, F. Lijn, R. Stokking, M. A. Ikram, M. W. Vernooij, M. M. B. Breteler, and W. J. Niessen, “Multi-spectral brain tissue segmentation using automatically trained k-nearest-neighbor classification,” NeuroImage, vol. 37, pp. 71–81, 2007.

J. Alirezaie, M. E. Jernigan, and C. Nahmias, “Automatic segmentation of cerebral MR images using artificial neural networks,” IEEE Trans. Nucl. Sci., vol. 45, no. 4, pp. 2174-2182, Aug 1998.

S. Ahmed, K. M. Iftekharuddin, and A. Vossough, “Efficacy of texture, shape, and intensity feature fusion for posterior-fossa tumor segmentation in MRI,”, IEEE Trans. Inf. Technol. Biomed., vol. 15, no. 2, pp. 206-213, Mar 2011.

K. M. Iftekharuddin, J. Zheng, M. A. Islam, R. J. Ogg, “Fractal-based brain tumor detection in multimodal MRI,” Applied Mathematics and Computation, vol. 207, pp. 23–41, 2009.

W. Dou, S. Ruan, Y. Chen, D. Bloyet, J.-M. Constans, “A framework of fuzzy information fusion for the segmentation of brain tumor tissues on MR images,” Image and Vision Computing, vol. 25, pp. 164–171, 2007.

N. Zhang, S. Ruan, S. Lebonvallet, Q. Liao, Y. Zhu, “Kernel feature selection to fuse multi-spectral MRI images for brain tumor segmentation,” Computer Vision and Image Understanding, vol. 115, pp. 256–269, 2011.

M. R. Kaus, S. K. Warfield, A. Nabavi, P. M. Black, F. A. Jolesz, R. Kikinis, “Automated segmentation of MR images of brain tumors,” Radiology, vol. 218, pp. 586–591, 2001.

H. Khotanlou, “3D brain tumors and internal brain structures segmentation in MR images,” Ph.D. dissertation, Informatique, Telecommunications et Electronique, Telecom ParisTech, Paris, 2008.

M. Prastawa, E. Bullitt, S. Ho, G. Gerig, “A brain tumor segmentation framework based on outlier detection”, Medical Image Analysis, vol. 8, pp. 275–283, Jul 2004.

T. Kohonen, The Self-Organizing Maps, 3rd Edition, Germany: Springer, 2002.

G. Gerig, O. Kubler, R. Kikinis. and F. A. Jolesz, “Nonlinear anisotropic filtering of MRI data,” IEEE Trans. Med. Imag., vol. 11, no. 2, pp. 221-232, 1992.

F. B. Mohamed, S. Vinitski, Scott H. Faro, C. F. Gonzalez, J. Mack, and T. Iwanaga, “Optimization of tissue segmentation of brain MR images based on multispectral 3D feature maps,” Magnetic Resonance Imaging, vol. 17, no. 3, pp. 403–409, 1999.

P. Perona, and J. Malik, “Scale-space and edge detection using anisotropic diffusion,” IEEE Trans. Pattern Anal. Mach. Intell., vol. 12, no. 7, 629-639, 1990.

Z. Zhou, Z. Ruan, “Multicontext wavelet-based thresholding segmentation of brain tissues in magnetic resonance images,” Magnetic Resonance Imaging, vol. 25, pp. 381–385, 2007.

Y. Zhang, Z. Dong, L. Wu, S. Wang, Z. Zhou, “Feature extraction of brain MRI by stationary wavelet transform,” in Int. Conf. Biomedical Eng. and Comput. Sci. (ICBECS), Wuhan, 2010, pp. 1-4.

M. Unser, “Texture classification and segmentation using wavelet frames,” IEEE Trans. Image Process., vol. 4, no. 11, pp. 1549–1650, 1995.

A. Demirhan, İ. Güler, “Combining stationary wavelet transform and self-organizing maps for brain MR image segmentation,” Eng. Applicat. of Artificial Intell., vol. 24, pp. 358–367, 2011.

R. A. Robb, Biomedical Imaging, Visualization and Analysis, U.S.A.: Wiley-Liss, Inc., 2000.

D. Rueckert, L. I. Sonoda, C. Hayes, D. L. G. Hill, M. O. Leach and D. J. Hawkes, “Nonrigid registration using free-form deformations: application to breast MR images”, IEEE Trans. Med. Imag., vol. 18, no. 8, pp. 712-721, 1999.

S. C. Kim, T. J. Kang, “Texture classification and segmentation using wavelet packet frame and gaussian mixture model,” Pattern Recognition, vol. 40, pp. 1207-1221, 2007.

E. Alhoniemi, J. Himberg, J. Parhankangas, J. Vesanta, (2010) SOM Toolbox for MATLAB, http://www.cis.hut.fi/projects/somtoolbox


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